CDS

Accession Number TCMCG057C03443
gbkey CDS
Protein Id XP_018437230.1
Location complement(join(22195659..22196134,22196207..22196384,22196474..22196694,22196778..22197093,22197165..22197967,22198045..22198198,22198296..22198381,22198906..22198993,22199079..22199210))
Gene LOC108809581
GeneID 108809581
Organism Raphanus sativus

Protein

Length 817aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018581728.1
Definition PREDICTED: elongator complex protein 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category BK
Description WD40 repeats
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11374        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000123        [VIEW IN EMBL-EBI]
GO:0000502        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006354        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006368        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008023        [VIEW IN EMBL-EBI]
GO:0008047        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008284        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010950        [VIEW IN EMBL-EBI]
GO:0010952        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016504        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0031248        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031537        [VIEW IN EMBL-EBI]
GO:0031538        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033588        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043248        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051345        [VIEW IN EMBL-EBI]
GO:0052547        [VIEW IN EMBL-EBI]
GO:0052548        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061133        [VIEW IN EMBL-EBI]
GO:0061134        [VIEW IN EMBL-EBI]
GO:0061135        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902493        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1905368        [VIEW IN EMBL-EBI]
GO:1905369        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCGAAGTCTCAGCGAAGAGAGTGTTCATAGGAGCAGGATGCAACAGAGTCGTCAATAACGTCTCTTGGGGAGCTTCTGGTCTCCTTTCCTTCGGTGCCCAAAACGCCGTTGCTATTTTCTGCCCTAAGACAGCACAGATTCTTACAACGCTCCCAGGTCACAAAGCTTCTGTCAATTGCACTCATTGGTTACCCAGTTCCAAGTTTGCTTTCAAAGCCAAGCATTTGGACCGGCATTATCTGCTCTCAGGTGATACAGATGGTGTCATCATCCTCTGGGAACTATCGACTAACAGCAACAATTGGAGACATGTACTACAACTTCCACAGTCTCACAAGAAAGGTGTTACTTGCATCACCGCGTTTATGTGTTCTGAAACCGATGCAATGTTTGCTTCCGGTTCTTCAGATGGAGTTGTGAATGTCTGGGATGTTTCTTTTCCATCGCAGCCTAGTGAGGAATGCAAAGTTTCGTGCTTGGACTCTATCTCTGCTGACTCCAAAGCAATTGTAACGCTTTCGTTAGCAGAGCTGCCTCAAAATCTTGGAAGATTCACCCTGGCGATGGGTGGATTAGACAACAAAATCAAACTCTACTGTGGAGAAAGAACGGGGAAGTTCACTTCTGTCTGTGAGCTTAAAGGCCACACAGACTGGATCCGGAGTTTGGACTTTTCATTACCAACAGAAGAAACCACCAATAGTATTATGCTTGTGAGTTCTTCACAGGACAAAGTCATTAGAATCTGGAAGCTTGTGTTAGTAGGTGATGTTGGCTCATGGCAAAGAGAAATCACTCTTGCTTCTTACATTGAAGGTCCAGTTTTCGTCTCAGGGAGGTTCACATATCAGGTTTCAGTAGAATCTGTTCTCATTGGACATGAAGATTGGGTCTATTCCGTGGAGTGGCAGCCTCCAGTGGACCACCACCAACCGTTGAGCATTTTATCGGCTTCAATGGACAAAACGATGATGATTTGGCGACCTGAGAAGAAAACTGGTGTTTGGGTGAACGTTGTGTGTGTAGGAGAGCTTAGTCACTGTGCTCTTGGCTTCTACGGTGGCCACTGGAGTCCAGATGGTGCGTCCATCCTGGCTCATGGATATGGTGGATCGTTTCATCTCTGGAGAAATGTTAGTAGCAGCAAAGAGTCTGAGAACTGGCAGATGCAGAAAGTCCCTTCAGGTCATTTTGCTGCTGTGACTGACATCACGTGGGCTAGAACCGGCGAGTACTTGCTTTCCGTGAGCCAAGATCAGACCACCCGGGTATTCTCGTCATGGAAGAGTGATGAGGAGGATGAGCATTGGCATGAACTGGCTCGCCCTCAGGTTCATGGTCATGACATTAATTGTGTGGCTATGGTTCAAGGTAAAGGCAACCACCGTTTTGTAAGTGGAGCAGAGGAGAAAGTTGTGAGAGTTTTCGAGGCTCCTCTGTCTTTCTTGAAGACACTGAACCACACTTGTTCCAGAGGAGAAGGAAGCTTCCCTGAGGATCTACAAGCAGATGTGCAGGTCCTTGGCGCCAACATGTCTGCTCTTGGTTTATCACAGAAACCTATCTACTTACACTCTTCTAGTGTACAGGTGGAGAGAAATGGCGGAGGAGAAGGTTTGGAGACATTTGAAACGGTTCCAGAGGCTGCTCCGGTGGAGTTGAAGGAGCCTCCAATAGAAGATCAGCTTGCGTTTCATACTTTATGGCCTGAATCTCATAAACTCTATGGTCATGGTAATGAACTCTTTTCTCTCTGCTGTGACCACAGCGGAAGCCTTGTTGCTTCTTCATGTAAGGCTCAATCTGCAGCCATGGCGGAGATATGGCTATGGGAGGTTGGGACATGGAAAGCTGTTGGTCGTTTGCAATCTCACAGTTTAACAGTGACACACTTGGAGTTCTCTTATGACGACACTCTGCTCTTGTCTGTCTCCAGAGATCGTCACTTCTCAGTGTTCTTTATCCGAAGAACAGAAAATGGCGAGGTTAGTCACAAACTCATGGCAAAGGTTGAAGCACACAAGAGGATCATCTGGGCATGCTCATGGAACCCATTTGGCCACCAGTTCGCAACTTCATCAAGAGACAAGACAGTGAAGATCTGGTCCATTGAGAAAGACGCTCGCGTCAAACAGGTTCTTGCCTTGCCTCAGTTTGGGAGCAGTGTCACTGCCGTGGCTTGGACGGGACTAGACCAGAAGGAGAAGACTGGGTGCGTAGCGGTCGGGATGGAAAGTGGACTGATTGAGCTGTGGAACATAAAGGTTAAAGAAACAGAGGAAGGGACAACAGCAACAGCAGCTCTTGCTCTGAAGCTTGAACCGTTCATGTGTCATGTCTCGGCCGTGAACAGGTTAGCGTGGAGACCATCCGAGAGTAACCAGAGCTTGCTGAGGTTAACTTCTTGTGGGGATGATAATTGCGTTAGAGTTTTTGACTTCAACTTCTGA
Protein:  
MSEVSAKRVFIGAGCNRVVNNVSWGASGLLSFGAQNAVAIFCPKTAQILTTLPGHKASVNCTHWLPSSKFAFKAKHLDRHYLLSGDTDGVIILWELSTNSNNWRHVLQLPQSHKKGVTCITAFMCSETDAMFASGSSDGVVNVWDVSFPSQPSEECKVSCLDSISADSKAIVTLSLAELPQNLGRFTLAMGGLDNKIKLYCGERTGKFTSVCELKGHTDWIRSLDFSLPTEETTNSIMLVSSSQDKVIRIWKLVLVGDVGSWQREITLASYIEGPVFVSGRFTYQVSVESVLIGHEDWVYSVEWQPPVDHHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSPDGASILAHGYGGSFHLWRNVSSSKESENWQMQKVPSGHFAAVTDITWARTGEYLLSVSQDQTTRVFSSWKSDEEDEHWHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFEAPLSFLKTLNHTCSRGEGSFPEDLQADVQVLGANMSALGLSQKPIYLHSSSVQVERNGGGEGLETFETVPEAAPVELKEPPIEDQLAFHTLWPESHKLYGHGNELFSLCCDHSGSLVASSCKAQSAAMAEIWLWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFFIRRTENGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSIEKDARVKQVLALPQFGSSVTAVAWTGLDQKEKTGCVAVGMESGLIELWNIKVKETEEGTTATAALALKLEPFMCHVSAVNRLAWRPSESNQSLLRLTSCGDDNCVRVFDFNF